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List of oral communications

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  • The impact of gene ontology evolution on gene ontology GO-term information content
    Agapito G1,2, Cannataro M1,2, Guzzi PH1,2, Milano M1,2
    1Department of Medical and Surgical Sciences, University of Catanzaro, Italy
    2CR Data Analytics University of Catanzaro, Italy
  • neXtProt tools for the identification and validation of human proteins by mass spectrometry
    Nikitin F2, Gateau A2, Schaeffer M1, Audot E2, Michel P-A2, Zahn-Zabal M2, Lane L1,2.
    1Department of Human Protein Science, Faculty of Medicine, University of Geneva, Geneva, Switzerland.
    2CALIPHO Group, SIB Swiss Institute of Bioinformatics, CMU, 1211 Geneva 4, Switzerland.

  • Combinational approach to detect membrane proteins
    Alballa M1, Butler G1,2
    1Department of Computer Science and Software Engineering, Concordia University, Montréal, Québec, Canada
    2Centre for Structural and Functional Genomics, Concordia University, Montréal, Québec, Canada
  • Array-based genotyping discloses signatures of artificial selection and provides insights into the history of durum wheat breeding in Italy
    D’Agostino N1, Taranto F2, Rodriguez M3, Minervini AP2, Pecchioni N2, Papa R4, De Vita P2
    1Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
    2Research Centre for Cereal & Industrial Crops, CREA CI, Foggia, Italy
    3Department of Agriculture, University of Sassari, Sassari, Italy
    4Department of Agricultural, Food, and Environmental Sciences, University Politecnica delle Marche, Ancona, Italy.
  • The articulated structure of KCTD proteins: an integrated structural biology approach
    Balasco N1, Smaldone G2, Ruggiero A1, Berisio R1, Vitagliano L1,2
    1Institute of Biostructures and Biomaging, CNR, Napoli, Italy.
    2IRCCS-SDN, Napoli, Italy
  • Identification of genomic variants responsible for pregnancy loss: a pilot study
    Buonaiuto S1, Di Biase I2, Aleotti V3, Damaggio G2, D’Ambrosio P2, Catapano O2, Esposito G2, Chierici M4, Pulijala M5, Ayub Q5, Furlanello C4, Garrison E6, Soranzo N5, Rubini M3, Di Biase S2, Colonna V1
    1National Research Council, Institute of Genetics and Biophysics Adriano Buzzati-Traverso, Napoli, Italy
    2MeriGen Research s.r.l., Napoli, Italy
    3University of Ferrara, Ferrara, Italy
    4FBK – Fondazione Bruno Kessler, Povo (Trento), Italy
    5Monash University Malaysia, Selangor Darul Ehsan, Malaysia
    6University of California, Santa Cruz, US
  • Structural determination of Streptococcus M1 protein interaction with human IgGs using targeted cross-linking mass spectrometry
    Khakzad H1,2,3, Happonen L4, Malmström J4, Malmström L1,2,3,4
    1Faculty of Science, Institute for Computational Science, University of Zurich, Switzerland
    2Service and Support for Science IT (S3IT), University of Zurich, Switzerland
    3Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland
    4Division of Infection Medicine, Department of Clinical Sciences, Lund University, Sweden
  • Predicting disorder and educated guess of mutations modulating the stability of coiled-coils
    Karami Y1,2, Gerlier D3, Longhi S4, Laine E1, Carbone A1,5
    1Sorbonne Université, UPMC University Paris 06, CNRS, IBPS, UMR 7238, Laboratoire de Biologie Computationnelle et Quantitative (LCQB), 75005 Paris, France.
    2Sorbonne Université, UPMC-Univ P6, Institut du Calcul et de la Simulation
    3CIRI, International Center for Infectiology Research, INSERM, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, Ecole Normale Supérieure de Lyon, Univ Lyon, Lyon, France.
    4Aix-Marseille University, CNRS, Architecture et Fonction des Macromolécules Biologiques (AFMB), UMR 7257, Marseille, France
    5Institut Universitaire de France
  • Automation and optimization of bioinformatics NGS pipelines on HPC architectures for the reuse of a large dataset
    Flati T1, Gioiosa S1, Chillemi G2, Castrignanò T1
    1CINECA, SuperComputing Applications and Innovation Department, Via dei Tizii 6, 00185 Roma, Italy.
    2DIBAF, University of Tuscia, 01100 Viterbo, Italy
  • Multiagent Simulation of Long-Distance Electrodynamic Interactions among Biomolecules
    Maestri S1,2, Merelli E1, Pettini M2
    1School of Science and Technology, University of Camerino, Camerino, Italy
    2CPT – Centre de Physique Théorique, Aix-Marseille University, Marseille, France
  • GeenaR: a web tool for MALDI-ToF mass spectra management
    Del Prete E1, Facchiano A2, Profumo A3, Angelini C1, Romano P3
    1Istituto per le Applicazioni del Calcolo, CNR, Napoli, Italy
    2Istituto di Scienze per l’Alimentazione, CNR, Avellino, Italy
    3IRCCS Ospedale Policlinico San Martino, Genova, Italy
  • Development of data fusion techniques for the integration of multi-domain genomic data
    Pfeffer M1, Uschmajew A1, Amaro A2, Pfeffer U2
    1Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany
    2IRCCS Ospedale Policlinico San Martino, Genova, Italy
  • Reliable simulation of count data for single cell RNA sequencing
    Giacomo Baruzzo1, Ilaria Patuzzi1, Barbara Di Camillo1
    1University of Padua, Italy



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