{"id":533,"date":"2014-09-16T14:53:44","date_gmt":"2014-09-16T12:53:44","guid":{"rendered":"http:\/\/www.igst.it\/nettab\/2014\/?page_id=533"},"modified":"2020-01-17T14:55:55","modified_gmt":"2020-01-17T13:55:55","slug":"posters","status":"publish","type":"page","link":"http:\/\/www.igst.it\/nettab\/2019\/programme\/posters\/","title":{"rendered":"Posters"},"content":{"rendered":"
<\/a><\/b><\/div>\n
\nPosters<\/strong><\/p>\n

Posters in PDF are being linked from here, given the agreement of presenters. For available presentations, the icon will be displayed.<\/p>\n

\n
\n
P01 – Coalminer: a parallel processing and user-customizable tool for GFF3 to JSON translation<\/b>
\nMiralto M1<\/sup>, AmbrosinoL1<\/sup>, Colantuono C1<\/sup>, Sangiovanni M1<\/sup>, Chiusano ML1,2<\/sup>
\n1<\/sup>Research Infrastructures for Marine biological resources department, Stazione Zoologica “Anton Dohrn”, Napoli
\n2<\/sup>Department of Agriculture, University of Naples Federico II, Portici, Italy<\/dd>\n
P02 – VarGenius2 finds SNVs and CNVs in WES, WGS and RNASeq and paves the way to implementation of downstream algorithms for cohort data traversing<\/b>
\nVaravallo A1<\/sup>, Musacchia F1<\/sup>, Castello L1<\/sup>, Torella A1<\/sup>, Banfi S1<\/sup>, Nigro V1,2<\/sup>, Casari G1<\/sup>
\n1<\/sup>Telethon Institute for Genetics and Medicine, Viale Campi Flegrei, 34, 80078, Pozzuoli (Naples), Italy
\n2<\/sup>Universit\u00e0 degli studi della Campania ‘Luigi Vanvitelli’, Caserta, Italy<\/p>\n
P03 – Weighted protein network analysis (WPCNA) decrypt Rab8b and Rab31 as key affiliates of exosomal secretion; extending their role in Parkinson\u2019s disease pathology seeding and spreading<\/b>
\nKumar R1,2,3<\/sup>, Donakonda S4<\/sup>, M\u00fcller SA1<\/sup>, Lichtenthaler SF1,6<\/sup>, H\u00f6glinger GU2,5<\/sup>, K\u00f6gelsperger T1,3<\/sup>
\n1<\/sup>German Center for Neurodegenerative Diseases e.V. (DZNE), Dept. for Translational Neurodegeneration, Munich, Germany
\n2<\/sup>Klinikum rechts der Isar der Technischen Universit\u00e4t M\u00fcnchen, Germany
\n3<\/sup>Neurologische Klinik und Poliklinik, Klinikum der Universit\u00e4t M\u00fcnchen, Ludwig-Maximilians-Universit\u00e4t, Munich, Germany
\n4<\/sup>Institute of Immunology and Experimental Oncology Technischen Universit\u00e4t M\u00fcnchen, Germany
\n5<\/sup>Department of Neurology, Hannover Medical School (MHH), Hannover, Germany
\n6<\/sup>Neuroproteomics, Institute for Advanced Study, Technical University of Munich, Munich, Germany.<\/p>\n
P04 – Bringing radiomics into a multi-omics framework for a comprehensive genotype\u2013phenotype characterization of oncological diseases<\/b>
\nZanfardino M1<\/sup>, Franzese M1<\/sup>, Pane K1<\/sup>, Cavaliere C1<\/sup>, Monti S1<\/sup>, Esposito G2<\/sup>, Salvatore M1<\/sup>, Aiello M1<\/sup>
\n1<\/sup>IRCCS SDN, Naples, Italy
\n2<\/sup>Bio Check Up S.r.l., Naples 80121, Italy<\/p>\n
P05 – ROBIN: an R package for validation of community robustness<\/b>
\nPolicastro V1<\/sup>, Righelli D1<\/sup>, Cutillo L2<\/sup>, De Feis I1<\/sup>, Carissimo A1<\/sup>
\n1<\/sup>Istituto per le Applicazioni del Calcolo ‘Mauro Picone’, CNR, Naples, Italy
\n2<\/sup>The School of Mathematics, University of Leeds, United Kingdom<\/p>\n
P06 – The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation<\/b>
\nKoehorst JJ1<\/sup>, Schaap PJ1<\/sup>, van Dam JCJ1<\/sup>, Vik JO2<\/sup>, Martins dos Santos VAP1<\/sup>, Suarez-Diez M1<\/sup>
\n1<\/sup>Wageningen University & Research, Wageningen, The Netherlands
\n2<\/sup>Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences, Norway<\/p>\n
P07 – ARPIR: Automatic RNA-Seq Pipelines with Interactive Report<\/b>
\nSpinozzi G1<\/sup>, Tini V1<\/sup>, Adorni A1<\/sup>, Falini B1<\/sup>, Martelli MP1<\/sup>
\n1<\/sup>Department of Medicine, Section of Hematology, University of Perugia, Perugia, Italy<\/p>\n
P08 – Jig of Life: An Uncertainty Analysis of Bayesian Network for sc-RNA seq<\/b>
\nLi S1<\/sup>
\n1<\/sup>University of Leeds, United Kingdom<\/dd>\n
P09 – Assessment of Crohn\u2019s Disease Genetic Variants and Risk Factors in an Inflammatory Bowel Disease Patient Population<\/b>
\nDago ND1,2<\/sup>, Pinelli M1<\/sup>, Giacomelli M1<\/sup>, Zunica F1<\/sup>, Tripodi SI1<\/sup>, Badolato R1<\/sup>, GENMICI study group.
\n1<\/sup>Department of Pediatric, Institut of Molecular Medecine Angelo Nocivelli, University of Brescia, Italy
\n2<\/sup>Department of Genetic and Biochemistry, Peleforo Gon Coulibaly University of Korhogo, Ivory Coast.<\/dd>\n
P10 – EnsMAP-DP – novel probabilistic method for clustering scRNAseq data<\/b>
\nKrzak M1<\/sup>, Raykov Y2<\/sup>, Boukouvalas A3<\/sup>, Cutillo L4<\/sup>, Angelini C1<\/sup>
\n1<\/sup>Institute for Applied Mathematics ‘Mauro Picone’, Naples, Italy
\n2<\/sup>Aston University, Birmingham, United Kingdom
\n3<\/sup>Prowler.io, Cambridge, United Kingdom
\n4<\/sup>School of Mathematics, University of Leeds, United Kingdom<\/dd>\n
P11 – Disclosing the key biological target of Crellastatin A through a combination of proteomic approaches<\/b>
\nMorretta E1,2<\/sup>, Di Mauro M1<\/sup>, Festa C3<\/sup>, Mozzicafreddo M4<\/sup>, Tosco A1<\/sup>, Monti MC1<\/sup>, Casapullo A1<\/sup>
\n1<\/sup>Department of Pharmacy, University of Salerno, Fisciano, Italy
\n2<\/sup>PhD Program in Drug Discovery and Development, Dipartimento di Farmacia, University of Salerno, Fisciano, Italy
\n3<\/sup>Department of Pharmacy, University of Naples ‘Federico II’, Naples, Italy
\n4<\/sup>School of Biosciences and Veterinary Medicine, University of Camerino, Italy<\/dd>\n
P12 – Carbamoyl-phosphate synthase 1, the missing piece in Phomoxanthone A induced apoptosis<\/b>
\nCeccacci S1<\/sup>, Morretta E1<\/sup>, Stork B2<\/sup>, Proksch P3<\/sup>, Monti MC1<\/sup>
\n1<\/sup>Department of Pharmacy, University of Salerno, Fisciano, Italy
\n2<\/sup>Heinrich-Heine-Universit\u00e4t, Molecular Medicine I, D\u00fcsseldorf, Germany
\n3<\/sup>Heinrich-Heine-Universit\u00e4t, Pharmaceutical Biology and Biotechnology, D\u00fcsseldorf, Germany<\/dd>\n
P13 – Toward Integrating Machine Learning and Modeling in Translational and Community Analysis of Interactomic Regulation Networks<\/b>
\nLiberati D1<\/sup>
\n1<\/sup>National Research Council, Milano, Italy<\/dd>\n
P14 – Bioinformatics applications for the study of molecular mechanisms and metabolic networks in oncological diseases<\/b>
\nDotolo S1,2<\/sup>, Facchiano A2<\/sup>, Forootani A1<\/sup>, Marabotti A3<\/sup>, Ritrovato P4<\/sup>, Troiano L5<\/sup>, Tagliaferri R1<\/sup>
\n1<\/sup>NeuRoNe Lab, Department of Business Sciences, Management & Innovation Systems (DISA-MIS), University of Salerno, Italy.
\n2<\/sup>Institute of Food Science (ISA-CNR), Avellino (Italy)
\n3<\/sup>Department of Chemistry and Biology “A. Zambelli” (DCB), University of Salerno, Italy
\n4<\/sup>Department of Computer and Electrical Engineering and Applied Mathematics (DIEM), University of Salerno, Italy
\n5<\/sup>Department of Engineering, University of Sannio, Benevento, Italy.<\/dd>\n
P15 – In-Silico Construction of Homo Sapiens Antimicrobial and Immunemodulatory Peptide (AMP) Database<\/b>
\nKumar A1<\/sup>, Csosz E1<\/sup>
\n1<\/sup>Proteomics Core Facility, Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, Debrecen, Hungary<\/dd>\n
P16 – HaDeX: an R package and web-server for analysis of data from hydrogen-deuterium exchange mass spectrometry experiments<\/b>
\nBurdukiewicz M1<\/sup>, Pucha\u0142a W2<\/sup>, Dabrowska KA2<\/sup>, Cysewski D2<\/sup>, Dadlez M2<\/sup>
\n1<\/sup>Faculty of Mathematics and Information Science, Warsaw University of Technology, Poland
\n2<\/sup>Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland<\/dd>\n
P17 – Genomic analysis of the PIWIL1-piRNA pathway in colorectal cancer cell lines: exploiting various bioinformatic tools and smallRNA databases for a precise analysis of piRNA<\/b>
\nGeles K1,2<\/sup>, Sellitto A1<\/sup>, D\u2019Agostino Y1<\/sup>, Weisz A1,2,3<\/sup>, Giurato G1,2<\/sup>, Rizzo F1,2<\/sup>
\n1<\/sup>Laboratory of Molecular Medicine and Genomics, Department of Medicine, Surgery and Dentistry ‘Scuola Medica Salernitana’, University of Salerno, Baronissi (SA), Italy
\n2<\/sup>Genomix4Life srl, Baronissi (SA), Italy
\n3<\/sup>Medical Genomics Program, Department of Onco\u2010Haematology \u0314 ‘SS. Giovanni di Dio e Ruggi d\u2019Aragona \u0313 University Hospital, University of Salerno, Salerno, Italy<\/dd>\n
P18 – A dockerized solution for somatic variants detection in patients affected by Clonal Hematopoiesis of Indeterminate Potential<\/b>
\nPalumbo D1<\/sup>, Giurato G2<\/sup>, Rizzo F2<\/sup>, Weisz A2<\/sup>
\n1<\/sup>Casa di Cura Montevergine, Mercogliano, Italy.
\n1<\/sup>Laboratory of Molecular Medicine and Genomics, Department of Medicine, Surgery and Dentistry “Scuola Medica Salernitana”, University of Salerno, Baronissi, Italy<\/dd>\n
P19 – MotoCell, a web application for quantitative study of cell movement<\/b>
\nTufano R1<\/sup>, Sepe L2<\/sup>, Toscano E1<\/sup>, Boccia A2<\/sup>, Paolella G1,2<\/sup>
\n1<\/sup>Department of Molecular Medicine and Medical Biotechnology, Naples, Italy
\n1<\/sup>CEINGE Advanced Biotechnologies, Naples, Italy<\/dd>\n
P20 – Analysis of NGS data for the identification of mutations involved in the pathogenesis of rare tumors<\/b>
\nMemoli D1<\/sup>, Tarallo R1<\/sup>, Giurato G1<\/sup>, Weisz A1<\/sup>
\n1<\/sup>Laboratory of Molecular Medicine and Genomics, Department of Medicine, Surgery and Dentistry ‘Scuola Medica Salernitana’, University of Salerno, Baronissi, Italy<\/dd>\n
P21 – Comparison of members of the TGase enzyme family: insight the structure&function relationships<\/b>
\nGiordano D1<\/sup>, Facchiano A1<\/sup>
\n1<\/sup>Istituto di Scienze dell\u2019Alimentazione, CNR, Avellino, Italy<\/dd>\n
P22 – Metagenomics pipeline for detection of biological entities from shotgun sequencing: a novel and cost effective approach<\/b>
\nFerravante C1<\/sup>, Di Loria A1<\/sup>, Ciaramella P1<\/sup>, Weisz2<\/sup>, Giurato G2<\/sup>
\n1<\/sup>Dep. of Veterinary Medicine and Animal Production – University of Naples Federico II, Naples, Italy
\n2<\/sup>Laboratory of Molecular Medicine and Genomics – Dep. of Medicine, Surgery and Dentistry “Scuola Medica Salernitana”, University of Salerno, Baronissi, Italy<\/dd>\n
P23 – Benchmarking of methods for predicting protein stability<\/b>
\nMarabotti A1<\/sup>, Del Prete E2<\/sup>, Scafuri B1,3<\/sup>, Facchiano A3<\/sup>
\n1<\/sup>Dept. Chemistry and Biology ‘A. Zambelli’, University of Salerno, Fisciano, Italy;
\n2<\/sup>CNR-IAC, National Research Council, Institute for Calculus Applications “Mauro Picone”, Naples, Italy
\n3<\/sup>CNR-ISA, National Research Council, Institute of Food Science, Avellino, Italy<\/dd>\n
P24 – Serum degradation analysis by MALDI\/ToF: a new method and tool<\/a><\/b>
\nRomano P1<\/sup>, Beitia M2<\/sup>, Profumo A1<\/sup>
\n1<\/sup>IRCCS Ospedale Policlinico San Martino, Genoa, Italy
\n2<\/sup>University of the Basque Country (UPV\/EHU), Leioa, Biscay, Spain<\/dd>\n
P25 – A reproducible research tool: the R6 Class easyReporting<\/b>
\nRighelli D1<\/sup>, Angelini C1<\/sup>
\n1<\/sup>Istituto per le Applicazioni del Calcolo “M. Picone” – CNR, Naples, Italy<\/dd>\n
P26 – A non-Markovian stochastic model for the accumulation of genetic mutations<\/b>
\nMeoli A1<\/sup>, Beerenwinkel N2<\/sup> Lebid M2<\/sup>
\n1<\/sup>Dipartimento di Matematica, Universit\u00e0 degli Studi di Salerno, Fisciano (SA), Italy
\n2<\/sup>Department of Biosystems Science and Engineering, ETH Z\u00fcrich, Basel, Switzerland<\/dd>\n
P27 – From Information Retrieval Benchmarking to Precision Medicine Knowledge Discovery<\/b>
\nRybinski M1<\/sup>, Karimi S1<\/sup>, Paris C1<\/sup>
\n1<\/sup>Data61, CSIRO, Australia<\/dd>\n
P28 – Tools integration for a large-scale searching of potential ligands of a protein target<\/b>
\nBiancaniello C1<\/sup>, Argenio MA1<\/sup>, Dotolo S1<\/sup>, Facchiano A1<\/sup>
\n1<\/sup>CNR-ISA, Avellino, Italy<\/dd>\n
P29 – Proteomics Approaches to the study of Post-Translational Modifications: the case of Paraoxonase 2 (PON2)<\/b>
\nCarusone TM1<\/sup>, Porzio E1<\/sup>, Cardiero G2<\/sup>, Lacerra G2<\/sup>, Manco G1<\/sup>
\n1<\/sup>CNR-IBBC, Naples, Italy
\n2<\/sup>CNR-IGB, Naples, Italy<\/dd>\n
P30 – The European Bioinformatics Community (EuBIC): who are we and what do we do?<\/b>
\nLocard-Paulet M1<\/sup>
\n1<\/sup>University of Copenhagen, Denmark<\/dd>\n<\/dl>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Posters Posters in PDF are being linked from here, given the agreement of presenters. For available presentations, the icon will be displayed. P01 – Coalminer: a parallel processing and user-customizable tool for GFF3 to JSON translation Miralto M1, AmbrosinoL1, Colantuono C1, Sangiovanni M1, Chiusano ML1,2 1Research Infrastructures for Marine biological resources department, Stazione Zoologica “Anton […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":4001,"menu_order":5,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-533","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/pages\/533","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/comments?post=533"}],"version-history":[{"count":19,"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/pages\/533\/revisions"}],"predecessor-version":[{"id":4628,"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/pages\/533\/revisions\/4628"}],"up":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/pages\/4001"}],"wp:attachment":[{"href":"http:\/\/www.igst.it\/nettab\/2019\/wp-json\/wp\/v2\/media?parent=533"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}