{"id":575,"date":"2014-09-26T14:15:40","date_gmt":"2014-09-26T14:15:40","guid":{"rendered":"http:\/\/www.igst.it\/nettab\/2014\/?page_id=575"},"modified":"2016-12-15T09:24:25","modified_gmt":"2016-12-15T08:24:25","slug":"scientific-programme","status":"publish","type":"page","link":"http:\/\/www.igst.it\/nettab\/2016\/programme\/scientific-programme\/","title":{"rendered":"Detailed programme"},"content":{"rendered":"<div align=\"right\"><b><a><img decoding=\"async\" title=\"Click to print this page\" src=\"\/nettab\/2015\/files\/2014\/12\/printButton.png\" border=\"0\" \/><\/a><\/b><\/div>\n<div align=\"justify\">\n<div style=\"font-size: 80%;\" align=\"justify\">This is the programme of the workshop only.<br \/>\nIn the <a href=\"..\/agenda-at-a-glance\/\">Agenda<\/a> page you will find times of all events. For detailed information on the other events, see related pages:<\/p>\n<ul>\n<li><a href=\"..\/hackathon\/\">ELIXIR Hackathon<\/a> (October 24, 2016)<\/li>\n<li><a href=\"..\/tutorials\/\">GOBLET \/ ELIXIR-ITA &#8220;Train-the-trainer&#8221; Tutorial<\/a> (October 24, 2016)<\/li>\n<li><a href=\"http:\/\/www.embnet.org\/agm\/2016\/\" target=\"_blank\">EMBnet Annual General Meeting<\/a> on the EMBnet web site (October 27-28, 2016)<\/li>\n<\/ul>\n<p>Slides ae being collected and will be linked from here, previous agreement by the presenters, in PDF. See the <img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"> icon.<\/div>\n<table style=\"padding: 15px;\" border=\"1\" width=\"100%\">\n<tbody>\n<tr align=\"left\" valign=\"top\" bgcolor=\"blue\">\n<td colspan=\"2\"><span style=\"color: white;\">Tuesday October 25, 2016<br \/>\nWorkshop day 1 @ CNR Main site, Piazzale Aldo Moro 7, Rome<\/span><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td align=\"center\">08.30-09.15<\/td>\n<td>Registration and poster hang-up<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td align=\"center\">09.15-09.40<\/td>\n<td>Welcome and Introduction<\/p>\n<div style=\"font-size: 80%;\"><u>Paolo Romano<\/u>, IRCCS AOU San Martino IST, Italy <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/Intro_Romano.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Domenica D&#8217;Elia<\/u>, Biomedical Technology Institute &#8211; CNR, Italy <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_DElia.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Erik Bongcam-Rudloff<\/u>, Swedish University of Agricultural Sciences, Sweden<\/div>\n<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td align=\"center\">09.40-10.20<\/td>\n<td><b>Opening Lecture<\/b><br \/>\n<span style=\"font-size:80%;\">Introduced by <u>Paolo Romano<\/u>, IRCCS AOU San Martino IST, Italy<\/span><\/td>\n<\/tr>\n<tr style=\"padding: 5px;\" align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>The future: partly FAIR, partly Cloudy<\/b><br \/>\n<u>Barend Mons<\/u>, Leiden University Medical Center (LUMC), Leiden, The Netherlands<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>10.20-11.00<\/td>\n<td><b>Scientific Session 1<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Paolo Romano<\/u>, IRCCS AOU San Martino IST, Italy<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>FAIRDOM: Reproducible Systems Biology through FAIR Asset Management<\/b><br \/>\n<u>Natalie Stanford<\/u>, Finn Bacall, Martin Golebiewski, et al.<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>BioShaDock: a Docker-based tools registry towards a bioinformatics reproducibility usage<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Sallou.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Olivier Sallou<\/u> and Francois Moreews<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>11.00-12.00<\/td>\n<td>Poster session with coffee break service<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>12.00-12.30<\/td>\n<td><b>Guest Lecture<\/b><br \/>\n<span style=\"font-size:80%;\">Introduced by <u>Domenica D&#8217;Elia<\/u>, Biomedical Technology Institute &#8211; CNR, Italy<\/span><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>Data sharing, standards and workflows in metabolomics; towards reproducibility in Metabolomics<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Salek.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Reza Salek<\/u>, European Bioinformatics Institute, Hinxton, United Kingdom<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>12.30-13.10<\/td>\n<td><b>Scientific Session 2<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Domenica D&#8217;Elia<\/u>, Biomedical Technology Institute &#8211; CNR, Italy<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>Pharmacophore modeling, virtual computational screening and biological evaluation studies<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Dotolo.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=16><\/a><br \/>\n<u>Serena Dotolo<\/u> and Angelo Facchiano<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Common Workflow Language<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Crusoe.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Michael Crusoe<\/u><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>13.10-14.20<\/td>\n<td>Lunch break<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>14.20-15.00<\/td>\n<td><b>Keynote Lecture<\/b><br \/>\n<span style=\"font-size:80%;\">Introduced by <u>Erik Bongcam-Rudloff<\/u>, Swedish University of Agricultural Sciences, Sweden<\/span><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>And then magic happens&#8230; (about linking different types of data and what is needed to make that work)<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Evelo.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Chris Evelo<\/u>, University of Maastricht, The Netherlands<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>15.00-15.40<\/td>\n<td><b>Scientific Session 3<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Erik Bongcam-Rudloff<\/u>, Swedish University of Agricultural Sciences, Sweden<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>Standardization in next-generation sequencing &#8211; Issues and approaches of establishing standards in a highly dynamic environment<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Endrullat.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=16><\/a><br \/>\n<u>Christoph Endrullat<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>A standard-based HPC platform for genome annotation, analysis and visualization<\/b><br \/>\n<u>Andrea Manconi<\/u>, Marco Moscatelli, Matteo Gnocchi and Luciano Milanesi<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>15.40-15.50<\/td>\n<td><b>Flash Poster presentations 1<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Erik Bongcam-Rudloff<\/u>, Swedish University of Agricultural Sciences, Sweden<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"4\"><\/td>\n<td><b>Modelling and Simulation of BioSystems inspired by Electronic Design Automation<\/b><br \/>\nRosario Distefano, Nickolas Goncharenko, <u>Rosalba Giugno<\/u> et al.<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Multi-type clustering for the identification of lncRNA-disease relationships<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Pio.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=16><\/a><br \/>\n<u>Gianvito Pio<\/u>, Francesco Serafino, Emanuele Barracchia et al.<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Good Laboratory Practices and L.I.M.S. system: the Challenge for a Next Generation Sequencing and Bioinformatic Research Laboratory<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Marzano.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Marinella Marzano<\/u>, Caterina Manzari, Daniela Filannino et al.<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Using the Nextflow framework for reproducible in-silico omics<\/b><br \/>\n<u>Paolo Di Tommaso<\/u>, Maria Chatzou, Evan Floden and Cedric Notredame<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>15.50-16.20<\/td>\n<td>Coffee break<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>16.20-17.00<\/td>\n<td><b>Keynote Lecture<\/b><br \/>\n<span style=\"font-size:80%;\">Introduced by <u>Barend Mons<\/u>, LUMC, Leiden, The Netherlands<\/span><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>Ensuring reproducibility and portability of NGS analysis workflows<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_vanHelden.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Jacques van Helden<\/u>, University of Aix-Marseille, Marseille, France<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>17.00-18.10<\/td>\n<td><b>Scientific Session 4<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Barend Mons<\/u>, LUMC, Leiden, The Netherlands<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"4\"><\/td>\n<td><b>The Galaxy tool lifecycle supporting reproducibility in scientific research<\/b><br \/>\n<u>Bj\u00f6rn Gr\u00fcning<\/u> and Dannon Baker<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>A Shiny based tool for NGS data Integration in Reproducible Spirit<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Righelli.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Dario Righelli<\/u>, Monica Franzese and Claudia Angelini<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Comprehensive approach to use Gene Ontology combinations for automated, semi-automated and expert-driven functional interpretation of high-throughput experimental results<\/b><br \/>\n<u>Aleksandra Gruca<\/u> and Marek Sikora<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Human non-coding RNAs interactions through network-based relation<\/b><br \/>\nGiorgio De Caro, <u>Vincenzo Bonnici<\/u>, Sabino Liuni et al.<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>18.10-18.30<\/td>\n<td><b>Flash Poster presentations 2<\/b><br \/>\n<span style=\"font-size:80%;\">Chair: <u>Barend Mons<\/u>, LUMC, Leiden, The Netherlands<\/span><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>Sustainability and robustness of mined biological knowledge: solutions using network-based pathway analysis<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Alexeyenko.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Andrey Alexeyenko<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>PISA-Tree: Standard Directory Tree as a Support for Reproducible Research<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Blejec.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Andrej Blejec<\/u> and Kristina Gruden<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>18.30<\/td>\n<td>Day Closure<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>20.30-23.00<\/td>\n<td>Social Dinner <span style=\"font-size: 80%;\">(registration required, accompanying persons welcome)<\/span><\/td>\n<\/tr>\n<tr>\n<td colspan=\"2\" bgcolor=\"black\"><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"blue\">\n<td colspan=\"2\"><span style=\"color: white;\">Wednesday October 26, 2016<br \/>\nWorkshop day 2 @ CNR Main site, Piazzale Aldo Moro 7, Rome<\/span><\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>08.00-09.00<\/td>\n<td>Registration and poster hang-up<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>09.00-09.40<\/td>\n<td><b>BITS Lecture<\/b><\/p>\n<div style=\"font-size: 80%;\">Chair: <u>Luciano Milanesi<\/u>, Biomedical Technology Institute, CNR, Milan, Italy<\/div>\n<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>How to create awareness, inform and educate<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Sansone.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Susanna Assunta Sansone<\/u>, Oxford eResearch Center, Oxford, United Kingdom<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>09.40-10.20<\/td>\n<td><b>Scientific Session 5<\/b><\/p>\n<div style=\"font-size: 80%;\">Chair: <u>Luciano Milanesi<\/u>, Biomedical Technology Institute, CNR, Milan, Italy<\/div>\n<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>Impact of Software Environment on Replicability of Biomedical Workflows<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Miksa.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Tomasz Miksa<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>A Pipeline for the Reconstruction of Cancer Progression Models Based on Probabilistic Causation<\/b><br \/>\n<u>Marco Antoniotti<\/u>, Giulio Caravagna, Luca De Sano et al.<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>10.20-11.20<\/td>\n<td>Poster session with coffee break service<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>11.20-12.10<\/td>\n<td><b>Scientific Session 6<\/b><\/p>\n<div style=\"font-size: 80%;\">Chair: <u>Chris Evelo<\/u>, University of Maastricht, The Netherlands<\/div>\n<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"3\"><\/td>\n<td><b>Bioschemas: structured data markup for life sciences with Schema.org<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Preste.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\nRafael C Jimenez and Carole Goble (presented by <u>Roberto Preste<\/u>)<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>A Robust Estimate of Performance of Reproducible Analytical Models for DREAM Challenges<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Rudnicki.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\nWojciech Lesi\u0144ski, Rados\u0142aw Piliszek and <u>Witold Rudnicki<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Wasabi: a web-based platform for evolutionary sequence analysis supporting reproducible research and sharing<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Veidenberg.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a> (see also <a href=\"http:\/\/tinyurl.com\/nettab16-wasabi\" target=\"_blank\">slides with audio<\/a>)<br \/>\n<u>Andres Veidenberg<\/u>, Ari L\u00f6ytynoja and Alan Medlar<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>12.10-12.25<\/td>\n<td><b>Flash Poster presentations 3<\/b><\/p>\n<div style=\"font-size: 80%;\">Chair: <u>Chris Evelo<\/u>, University of Maastricht, The Netherlands<\/div>\n<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"5\"><\/td>\n<td><b>Correlated mutations distinguish misfolded and properly folded proteins<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Wozniak.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=16><\/a><br \/>\n<u>Pawel P. Wo\u017aniak<\/u>, Malgorzata Kotulska and Gert Vriend<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>RNA Structures Description Standards<\/b> <a href=\"\/nettab\/2016\/files\/2016\/12\/NETTAB2016_Smietanski.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=16><\/a><br \/>\n<u>Jacek \u015amieta\u0144ski<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>PyRosetta energy terms as indicators for protein mirror models<\/b><br \/>\n<u>Monika Kurczynska<\/u>, Bogumil Konopka and Malgorzata Kotulska<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>An assessment of reporting quality of data analysis in metabolomics and a recommended tool for encouraging reporting guideline uptake<\/b><br \/>\n<u>Elizabeth Considine<\/u>, Greigoire Thomas, Louise Kenny and Ali Khashan<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Parallel Prediction of Protein Binding Sites<\/b><br \/>\n<u>Maria Mirto<\/u> and Giovanni Aloisio<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>12.25-13.00<\/td>\n<td><b>Guest Lecture<\/b><\/p>\n<div style=\"font-size: 80%;\">Introduced by <u>Chris Evelo<\/u>, University of Maastricht, The Netherlands<\/div>\n<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td><\/td>\n<td><b>BioSharing \u2013 mapping the landscape of Standards, Databases and Data policies in the life, biomedical and environmental sciences<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_McQuilton.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Peter McQuilton<\/u>, Oxford eResearch Center, Oxford, United Kingdom<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\">\n<td>13.00-13.10<\/td>\n<td><b>First announcement of NETTAB 2017<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Urso_Romano.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Maurizio Urso<\/u>, HPC &amp; Networking Institute &#8211; CNR, Palermo, Italy<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>13.10-14.10<\/td>\n<td>Lunch break<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>14.10-14.40<\/td>\n<td>Special Session <b>&quot;Education and Training&quot;<\/b><\/p>\n<div style=\"font-size: 80%;\"><u>Terri Attwood<\/u> (University of Manchester, UK) &#8211; Introduction to the Session <a href=\"\/nettab\/2016\/files\/2016\/12\/NETTAB2016_Attwood.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Allegra Via<\/u> (IBBE-CNR) &#8211; The ELIXIR-IIB Training Programme<\/div>\n<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>14.40-15.40<\/td>\n<td><b>Invited talks<\/b><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"3\"><\/td>\n<td><b>GOBLET: Working towards FAIR bioinformatics training<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_vanGelder.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Celia van Gelder<\/u>, DTL\/ELIXIR-NL, The Netherlands<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Reproducibility and standards: the ELIXIR Training Platform perspective<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Palagi.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Patricia Palagi<\/u>, Swiss Bioinformatics Institute, Switzerland<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>CHARME, a new initiative for standards training<\/b> <a href=\"\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Gruden.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Kristina Gruden<\/u>, National Institute of Biology, Slovenia<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightgreen\">\n<td>15.40-16.10<\/td>\n<td>Tea break<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>16.10-17.10<\/td>\n<td><b>Oral communications<\/b><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"3\"><\/td>\n<td><b>Standards in education of bioinformatics &#8211; the ideals and practice exemplified by educational programs in Polish universities<\/b><br \/>\n<u>Malgorzata Kotulska<\/u>, Wroclaw University of Science and Technology, Poland<\/td>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Software and Data Carpentry: Building Skills and Perspectives to Enable Data-Driven Research<\/b> <a href=\"\/nettab\/2016\/files\/2016\/12\/NETTAB2016_Duckles.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\nTracy Teal and <u>Jonah Duckles<\/u><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Critical Assessment of Student Programming in Italy<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Paladin1.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Paladin2.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Lisanna Paladin<\/u>, Marco Necci, Giulia Babbi et al.<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>17.10-17.50<\/td>\n<td><b>Invited talks<\/b><\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td rowspan=\"2\"><\/td>\n<td><b>Data Science Skills for Life Science Research and Industry<\/b><br \/>\n<u>Andrea Manieri<\/u>, Engineering Ingegneria Informatica Spa, Italy<\/td>\n<\/tr>\n<tr style=\"font-size: 80%;\" align=\"left\" valign=\"top\">\n<td><b>Using virtual machine (VM) images in training to increase reproducibility: ideas from the VM&amp;Cloud EXCELERATE workshop<\/b> <a href=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/11\/NETTAB2016_Korpelainen.pdf\" target=\"_blank\"><img decoding=\"async\" src=\"http:\/\/www.igst.it\/nettab\/2016\/files\/2016\/10\/pdf_icon.png\" width=\"16\"><\/a><br \/>\n<u>Eija Korpelainen<\/u>, CSC, Finland<\/td>\n<\/tr>\n<tr align=\"left\" valign=\"top\" bgcolor=\"lightblue\">\n<td>17.50-18.30<\/td>\n<td><b>Panel discussion<\/b><\/td>\n<\/tr>\n<tr style=\"border-bottom: 1px solid #000;\" align=\"left\" valign=\"top\">\n<td rowspan=\"1\"><\/td>\n<td><b>Challenges in the training arena in the context of reproducibility and standards in bioinformatics<\/b><br \/>\nChairs: <u>Erik Bongcam-Rudloff<\/u>, SLU, Sweden &amp; <u>Sarah Morgan<\/u>, EBI, United Kingdom<br \/>\n<font style=\"font-size:80%\">All session speakers attending, comments and questions may follow.<\/font><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>This is the programme of the workshop only. In the Agenda page you will find times of all events. For detailed information on the other events, see related pages: ELIXIR Hackathon (October 24, 2016) GOBLET \/ ELIXIR-ITA &#8220;Train-the-trainer&#8221; Tutorial (October 24, 2016) EMBnet Annual General Meeting on the EMBnet web site (October 27-28, 2016) Slides [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":7,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":{"footnotes":""},"class_list":["post-575","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/pages\/575","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/comments?post=575"}],"version-history":[{"count":184,"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/pages\/575\/revisions"}],"predecessor-version":[{"id":2593,"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/pages\/575\/revisions\/2593"}],"up":[{"embeddable":true,"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/pages\/7"}],"wp:attachment":[{"href":"http:\/\/www.igst.it\/nettab\/2016\/wp-json\/wp\/v2\/media?parent=575"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}